Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation c-type cytochrome soxx | RPYSC3_RS22705 | Not Available | Positive | 4908611 - 4909354 | 26469.4 |
| glcg/hbps family heme-binding protein | RPYSC3_RS22710 | Not Available | Positive | 4909524 - 4910021 | 16539.1 |
| soxw family protein | RPYSC3_RS22715 | Not Available | Negative | 4910252 - 4910845 | 21946.4 |
| cytochrome c biogenesis ccda family protein | RPYSC3_RS22720 | Not Available | Negative | 4910874 - 4911617 | 25291.8 |
| thioredoxin fold domain-containing protein | RPYSC3_RS22725 | Not Available | Positive | 4911658 - 4912056 | 14540.8 |
| arsr/smtb family transcription factor | RPYSC3_RS22730 | Not Available | Positive | 4912095 - 4912469 | 14278.2 |
| yeee/yede family protein | RPYSC3_RS22735 | Not Available | Positive | 4912546 - 4913748 | 41655.4 |
| dsre family protein | RPYSC3_RS22740 | Not Available | Negative | 4913663 - 4914115 | 15914.1 |
| yeee/yede family protein | RPYSC3_RS22745 | Not Available | Negative | 4914351 - 4915400 | 35311.0 |
| duf3240 family protein | RPYSC3_RS22750 | Not Available | Negative | 4915609 - 4915914 | 10835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
