Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | RPYSC3_RS22505 | Not Available | Positive | 4873428 - 4874273 | 30044.0 |
| histidinol-phosphate transaminase | RPYSC3_RS22510 | Not Available | Positive | 4874316 - 4875413 | 39251.0 |
| prephenate/arogenate dehydrogenase family protein | RPYSC3_RS22515 | Not Available | Positive | 4875410 - 4876351 | 33525.1 |
| brnt family toxin | RPYSC3_RS22520 | Not Available | Positive | 4876918 - 4877196 | 10755.0 |
| brna antitoxin family protein | RPYSC3_RS22525 | Not Available | Positive | 4877150 - 4877461 | 11595.9 |
| magnesium transporter cora family protein | RPYSC3_RS22530 | Not Available | Negative | 4877541 - 4878521 | 36309.2 |
| l,d-transpeptidase | RPYSC3_RS22535 | Not Available | Positive | 4878867 - 4879550 | 24494.5 |
| extensin family protein | RPYSC3_RS22540 | Not Available | Negative | 4879752 - 4880831 | 37418.3 |
| fatty-acid--coa ligase | RPYSC3_RS22545 | Not Available | Positive | 4880952 - 4882580 | 59903.5 |
| endonuclease domain-containing protein | RPYSC3_RS22550 | Not Available | Positive | 4882794 - 4883162 | 14099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
