Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | RPYSC3_RS02145 | Not Available | Negative | 449132 - 450577 | 54536.2 |
| tonb-dependent receptor | RPYSC3_RS02150 | Not Available | Negative | 450582 - 452858 | 81967.0 |
| translational gtpase typa | RPYSC3_RS02155 | Not Available | Positive | 453592 - 455415 | 67126.2 |
| flavin monoamine oxidase family protein | RPYSC3_RS02160 | Not Available | Positive | 455645 - 456913 | 45064.3 |
| gnat family n-acetyltransferase | RPYSC3_RS02165 | Not Available | Positive | 457089 - 457598 | 18864.5 |
| inorganic diphosphatase | RPYSC3_RS02170 | Not Available | Positive | 457675 - 458214 | 19896.9 |
| m20 family peptidase | RPYSC3_RS02175 | Not Available | Positive | 458250 - 459731 | 53545.3 |
| is481 family transposase | RPYSC3_RS02180 | Not Available | Negative | 459798 - 460967 | 44497.6 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | RPYSC3_RS02185 | Not Available | Negative | 461176 - 462063 | 30591.6 |
| duf167 domain-containing protein | RPYSC3_RS02190 | Not Available | Negative | 462170 - 462496 | 11467.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
