Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4859568 - 4859643 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4859677 - 4859753 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4859954 - 4861442 | Not Available |
| m23 family metallopeptidase | RPYSC3_RS22470 | Not Available | Positive | 4862393 - 4864435 | 72832.9 |
| hypothetical protein | RPYSC3_RS22475 | Not Available | Positive | 4864584 - 4866212 | 56122.6 |
| atp-dependent chaperone clpb | RPYSC3_RS22480 | Not Available | Negative | 4866363 - 4869002 | 96597.0 |
| mosc domain-containing protein | RPYSC3_RS22485 | Not Available | Positive | 4869228 - 4870016 | 28418.2 |
| tigr02594 family protein | RPYSC3_RS22490 | Not Available | Negative | 4870205 - 4870951 | 26553.3 |
| methionine biosynthesis protein metw | RPYSC3_RS22495 | Not Available | Negative | 4871174 - 4871869 | 26117.5 |
| homoserine o-acetyltransferase metx | RPYSC3_RS22500 | Not Available | Negative | 4871872 - 4873074 | 43743.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
