Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system yafq family toxin | RPYSC3_RS22235 | Not Available | Positive | 4813256 - 4813528 | 10499.6 |
| lytic murein transglycosylase | RPYSC3_RS22240 | Not Available | Positive | 4813710 - 4815011 | 46542.4 |
| substrate-binding domain-containing protein | RPYSC3_RS22245 | Not Available | Positive | 4815093 - 4816277 | 42837.5 |
| abc transporter atp-binding protein | RPYSC3_RS22250 | Not Available | Positive | 4816432 - 4817196 | 27453.5 |
| abc transporter atp-binding protein | RPYSC3_RS22260 | Not Available | Positive | 4817606 - 4818328 | 25767.7 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS22265 | Not Available | Positive | 4818444 - 4819469 | 35881.1 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS22270 | Not Available | Positive | 4819466 - 4820533 | 37684.5 |
| hypothetical protein | RPYSC3_RS22275 | Not Available | Positive | 4820904 - 4821212 | 10498.3 |
| alkene reductase | RPYSC3_RS22280 | Not Available | Positive | 4821457 - 4822557 | 39474.6 |
| abc transporter substrate-binding protein | RPYSC3_RS22290 | Not Available | Negative | 4823064 - 4824851 | 66764.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
