Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | RPYSC3_RS22185 | Not Available | Positive | 4802065 - 4804338 | 80750.1 |
| gnat family n-acetyltransferase | RPYSC3_RS22190 | Not Available | Negative | 4804361 - 4804873 | 18634.8 |
| mechanosensitive ion channel family protein | RPYSC3_RS22195 | Not Available | Negative | 4804920 - 4806572 | 59131.8 |
| nudix domain-containing protein | RPYSC3_RS22200 | Not Available | Negative | 4806831 - 4807319 | 18030.7 |
| metallophosphoesterase family protein | RPYSC3_RS22205 | Not Available | Positive | 4807454 - 4808335 | 32510.0 |
| hypothetical protein | RPYSC3_RS22210 | Not Available | Negative | 4808495 - 4809046 | 20042.3 |
| hypothetical protein | RPYSC3_RS22215 | Not Available | Negative | 4809310 - 4809525 | 7905.34 |
| isocitrate lyase | RPYSC3_RS22220 | Not Available | Negative | 4809550 - 4811184 | 60721.9 |
| short-chain fatty acyl-coa regulator family protein | RPYSC3_RS22225 | Not Available | Positive | 4811398 - 4812840 | 54483.3 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | RPYSC3_RS22230 | Not Available | Positive | 4812877 - 4813245 | 13388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
