Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS22085 | Not Available | Negative | 4781192 - 4781737 | 20310.5 |
| branched-chain amino acid aminotransferase | RPYSC3_RS22090 | Not Available | Positive | 4782022 - 4783134 | 40421.1 |
| dna mismatch repair endonuclease mutl | RPYSC3_RS22095 | Not Available | Negative | 4783455 - 4785242 | 64345.0 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | RPYSC3_RS22100 | Not Available | Negative | 4785427 - 4785846 | 15492.8 |
| m16 family metallopeptidase | RPYSC3_RS22105 | Not Available | Negative | 4785998 - 4787380 | 49642.4 |
| m16 family metallopeptidase | RPYSC3_RS22110 | Not Available | Negative | 4787425 - 4788816 | 50609.2 |
| hypothetical protein | RPYSC3_RS22115 | Not Available | Negative | 4788986 - 4789702 | 25317.7 |
| signal peptidase ii | RPYSC3_RS22120 | Not Available | Negative | 4789784 - 4790278 | 17296.6 |
| isoleucine--trna ligase | RPYSC3_RS22125 | Not Available | Negative | 4790504 - 4793521 | 111746.0 |
| mbca/pars/xre antitoxin family protein | RPYSC3_RS22130 | Not Available | Positive | 4793679 - 4794005 | 12162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
