Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | RPYSC3_RS02095 | Not Available | Negative | 438367 - 439566 | 44505.7 |
| invasion associated locus b family protein | RPYSC3_RS02100 | Not Available | Negative | 439752 - 440327 | 19522.5 |
| sdr family oxidoreductase | RPYSC3_RS02105 | Not Available | Negative | 440482 - 441318 | 29192.1 |
| is481 family transposase | RPYSC3_RS02110 | Not Available | Negative | 441392 - 442561 | 44497.6 |
| nadph:quinone oxidoreductase family protein | RPYSC3_RS02115 | Not Available | Positive | 442842 - 443816 | 34072.4 |
| phytoene desaturase family protein | RPYSC3_RS02120 | Not Available | Negative | 443878 - 446013 | 75847.5 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS02125 | Not Available | Positive | 446151 - 446771 | 22877.7 |
| ykva family protein | RPYSC3_RS02130 | Not Available | Negative | 446793 - 447167 | 13981.8 |
| 4a-hydroxytetrahydrobiopterin dehydratase | RPYSC3_RS02135 | Not Available | Negative | 447250 - 447552 | 11310.4 |
| taxi family trap transporter solute-binding subunit | RPYSC3_RS02140 | Not Available | Positive | 447740 - 449128 | 48915.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
