Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c/d | RPYSC3_RS21540 | Not Available | Negative | 4670530 - 4672275 | 65838.3 |
| nuob/complex i 20 kda subunit family protein | RPYSC3_RS21545 | Not Available | Negative | 4672272 - 4672898 | 23239.1 |
| nadh-quinone oxidoreductase subunit a | RPYSC3_RS21550 | Not Available | Negative | 4672895 - 4673284 | 13691.0 |
| glucan abc transporter atp-binding protein/ permease | RPYSC3_RS21555 | Not Available | Positive | 4673733 - 4675532 | 65537.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | RPYSC3_RS21560 | Not Available | Positive | 4675702 - 4677150 | 50506.8 |
| long-chain fatty acid--coa ligase | RPYSC3_RS21565 | Not Available | Positive | 4677425 - 4679116 | 61428.8 |
| peroxiredoxin | RPYSC3_RS21570 | Not Available | Positive | 4679363 - 4679848 | 17420.0 |
| ribonuclease hi | RPYSC3_RS21575 | Not Available | Negative | 4679976 - 4680443 | 17304.5 |
| homoserine kinase | RPYSC3_RS21580 | Not Available | Negative | 4680440 - 4681423 | 35616.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | RPYSC3_RS21585 | Not Available | Negative | 4681524 - 4682486 | 34597.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
