Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS21240 | Not Available | Positive | 4607524 - 4607841 | 11590.5 |
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS25320 | Not Available | Positive | 4607951 - 4608130 | 6761.24 |
| 3-hydroxybutyrate dehydrogenase | RPYSC3_RS21250 | Not Available | Negative | 4608294 - 4609082 | 27538.3 |
| duf3734 domain-containing protein | RPYSC3_RS21255 | Not Available | Negative | 4609132 - 4610271 | 42852.5 |
| cap domain-containing protein | RPYSC3_RS21260 | Not Available | Negative | 4610367 - 4610882 | 18082.7 |
| glutamine synthetase beta-grasp domain-containing protein | RPYSC3_RS21265 | Not Available | Negative | 4611129 - 4612166 | 38694.6 |
| hypothetical protein | RPYSC3_RS25025 | Not Available | Positive | 4612449 - 4612664 | 8032.43 |
| duf2735 domain-containing protein | RPYSC3_RS21270 | Not Available | Positive | 4612661 - 4612843 | 6514.57 |
| glutaminase | RPYSC3_RS21275 | Not Available | Negative | 4612949 - 4613884 | 33050.7 |
| duf934 domain-containing protein | RPYSC3_RS21280 | Not Available | Negative | 4614049 - 4614558 | 18972.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
