Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | RPYSC3_RS21190 | Not Available | Negative | 4599228 - 4599656 | 14643.5 |
| tetratricopeptide repeat protein | RPYSC3_RS21195 | Not Available | Negative | 4599780 - 4600442 | 24370.5 |
| type b 50s ribosomal protein l36 | RPYSC3_RS21200 | Not Available | Negative | 4600538 - 4600663 | 5065.38 |
| amidohydrolase family protein | RPYSC3_RS21205 | Not Available | Positive | 4600974 - 4601843 | 32730.2 |
| haloacid dehalogenase type ii | RPYSC3_RS21210 | Not Available | Positive | 4601985 - 4602725 | 27144.7 |
| ybak/ebsc family protein | RPYSC3_RS21215 | Not Available | Positive | 4602801 - 4603283 | 16916.6 |
| hypothetical protein | RPYSC3_RS21220 | Not Available | Negative | 4603356 - 4603646 | 10645.6 |
| methyl-accepting chemotaxis protein | RPYSC3_RS21225 | Not Available | Negative | 4603820 - 4605145 | 45673.0 |
| pas domain-containing protein | RPYSC3_RS21230 | Not Available | Negative | 4605120 - 4605641 | 19678.5 |
| lipopolysaccharide biosynthesis protein | RPYSC3_RS21235 | Not Available | Positive | 4606185 - 4607552 | 48888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
