Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | RPYSC3_RS21090 | Not Available | Negative | 4578112 - 4578855 | 26495.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | RPYSC3_RS21095 | Not Available | Positive | 4579008 - 4579496 | 16420.9 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | RPYSC3_RS21100 | Not Available | Positive | 4579493 - 4580593 | 39209.9 |
| 30s ribosomal protein s21 | RPYSC3_RS21105 | Not Available | Positive | 4580750 - 4581013 | 10048.5 |
| hypothetical protein | RPYSC3_RS21110 | Not Available | Negative | 4581188 - 4582066 | 30461.1 |
| cupin domain-containing protein | RPYSC3_RS21115 | Not Available | Negative | 4582216 - 4582503 | 10403.3 |
| voc family protein | RPYSC3_RS21120 | Not Available | Positive | 4582707 - 4583081 | 13409.1 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | RPYSC3_RS21125 | Not Available | Negative | 4583265 - 4584668 | 48099.6 |
| proton-translocating transhydrogenase family protein | RPYSC3_RS21130 | Not Available | Negative | 4584682 - 4585005 | 11624.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | RPYSC3_RS21135 | Not Available | Negative | 4585031 - 4586158 | 39159.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
