Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmb family transcriptional regulator | RPYSC3_RS21040 | Not Available | Negative | 4567373 - 4568179 | 29869.2 |
| abc transporter permease | RPYSC3_RS21045 | Not Available | Positive | 4568410 - 4569243 | 30088.6 |
| abc transporter atp-binding protein | RPYSC3_RS21050 | Not Available | Positive | 4569255 - 4570100 | 30725.1 |
| abc transporter substrate-binding protein | RPYSC3_RS21055 | Not Available | Positive | 4570104 - 4571159 | 37443.1 |
| flavin reductase family protein | RPYSC3_RS21060 | Not Available | Positive | 4571381 - 4572004 | 22456.9 |
| carbon-nitrogen hydrolase family protein | RPYSC3_RS21065 | Not Available | Positive | 4572016 - 4572963 | 33595.3 |
| eal domain-containing protein | RPYSC3_RS21070 | Not Available | Negative | 4573003 - 4575681 | 97579.2 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS21075 | Not Available | Positive | 4575851 - 4576951 | 38204.0 |
| ydch family protein | RPYSC3_RS21080 | Not Available | Negative | 4577379 - 4577558 | 6837.35 |
| ydch family protein | RPYSC3_RS21085 | Not Available | Positive | 4577916 - 4578122 | 7725.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
