Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1858 domain-containing protein | RPYSC3_RS20935 | Not Available | Negative | 4545503 - 4545727 | 8127.86 |
| copper-containing nitrite reductase | RPYSC3_RS20940 | Not Available | Positive | 4545965 - 4547077 | 40074.1 |
| formylglycine-generating enzyme family protein | RPYSC3_RS20945 | Not Available | Positive | 4547230 - 4548111 | 31713.4 |
| thymidine phosphorylase family protein | RPYSC3_RS20950 | Not Available | Positive | 4548261 - 4549805 | 54622.1 |
| ribose-phosphate pyrophosphokinase | RPYSC3_RS20955 | Not Available | Positive | 4549802 - 4550713 | 32129.8 |
| mbl fold metallo-hydrolase | RPYSC3_RS20960 | Not Available | Positive | 4550710 - 4552338 | 59584.5 |
| hypothetical protein | RPYSC3_RS20965 | Not Available | Positive | 4552512 - 4552727 | 7516.98 |
| tautomerase family protein | RPYSC3_RS20970 | Not Available | Negative | 4552751 - 4553188 | 15985.0 |
| lysr family transcriptional regulator | RPYSC3_RS20975 | Not Available | Positive | 4553255 - 4554124 | 31479.6 |
| fe(3+) abc transporter substrate-binding protein | RPYSC3_RS20980 | Not Available | Positive | 4554243 - 4555253 | 36188.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
