Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS20790 | Not Available | Positive | 4514494 - 4516602 | 77786.1 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25315 | Not Available | Positive | 4517027 - 4517262 | 8384.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | RPYSC3_RS20795 | Not Available | Positive | 4517808 - 4519217 | 51161.9 |
| phosphomannomutase/phosphoglucomutase | RPYSC3_RS20800 | Not Available | Positive | 4519266 - 4520762 | 54590.4 |
| hypothetical protein | RPYSC3_RS20805 | Not Available | Positive | 4520922 - 4521260 | 12065.6 |
| hypothetical protein | RPYSC3_RS20810 | Not Available | Negative | 4521294 - 4521539 | 9320.96 |
| peptide-methionine (r)-s-oxide reductase msrb | RPYSC3_RS20815 | Not Available | Negative | 4521774 - 4522190 | 15144.8 |
| peptide-methionine (s)-s-oxide reductase msra | RPYSC3_RS20820 | Not Available | Negative | 4522219 - 4522929 | 25097.8 |
| Trna-undet | Not Available | Not Available | Positive | 4523235 - 4523309 | Not Available |
| carbamoyl-phosphate synthase large subunit | RPYSC3_RS20830 | Not Available | Positive | 4523485 - 4526814 | 120148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
