Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPYSC3_RS20530 | Not Available | Negative | 4456666 - 4457382 | 25338.8 |
| abc transporter atp-binding protein | RPYSC3_RS20535 | Not Available | Negative | 4457375 - 4458127 | 27110.8 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS20540 | Not Available | Negative | 4458124 - 4459152 | 36838.2 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS20545 | Not Available | Negative | 4459152 - 4460018 | 30751.8 |
| abc transporter substrate-binding protein | RPYSC3_RS20550 | Not Available | Negative | 4460204 - 4461382 | 41606.3 |
| hypothetical protein | RPYSC3_RS20560 | Not Available | Positive | 4461723 - 4462019 | 10270.5 |
| duf2939 domain-containing protein | RPYSC3_RS20565 | Not Available | Positive | 4462074 - 4462661 | 20706.4 |
| formyltetrahydrofolate deformylase | RPYSC3_RS20570 | Not Available | Negative | 4462664 - 4463527 | 32639.2 |
| uroporphyrinogen-iii synthase | RPYSC3_RS20575 | Not Available | Positive | 4463659 - 4464504 | 30391.7 |
| branched-chain amino acid abc transporter substrate-binding protein | RPYSC3_RS20580 | Not Available | Positive | 4464747 - 4465979 | 44901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
