Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RPYSC3_RS01950 | Not Available | Positive | 402148 - 402606 | 16696.2 |
| pin domain-containing protein | RPYSC3_RS01955 | Not Available | Positive | 402608 - 403198 | 21737.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | RPYSC3_RS01960 | Not Available | Negative | 403384 - 405810 | 88231.5 |
| 50s ribosomal protein l11 methyltransferase | RPYSC3_RS01965 | Not Available | Negative | 406219 - 406968 | 26895.4 |
| thioredoxin trxc | RPYSC3_RS01970 | Not Available | Negative | 407072 - 407509 | 15946.2 |
| zinc-dependent alcohol dehydrogenase family protein | RPYSC3_RS01975 | Not Available | Negative | 407639 - 408622 | 34325.2 |
| chab family protein | RPYSC3_RS01980 | Not Available | Negative | 408699 - 408920 | 8345.73 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | RPYSC3_RS01985 | Not Available | Positive | 409142 - 409864 | 25308.5 |
| universal stress protein | RPYSC3_RS01990 | Not Available | Positive | 410027 - 410851 | 30024.3 |
| alpha-glucosidase/alpha-galactosidase | RPYSC3_RS01995 | Not Available | Negative | 411060 - 412340 | 47405.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
