Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein biosynthesis integral membrane protein murj | RPYSC3_RS20340 | Not Available | Negative | 4406283 - 4407812 | 54213.6 |
| degt/dnrj/eryc1/strs family aminotransferase | RPYSC3_RS20345 | Not Available | Negative | 4407991 - 4409142 | 40495.7 |
| gfo/idh/moca family protein | RPYSC3_RS20350 | Not Available | Negative | 4409198 - 4410193 | 35189.8 |
| nad-dependent epimerase | RPYSC3_RS20355 | Not Available | Negative | 4410334 - 4411326 | 36712.0 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | RPYSC3_RS20360 | Not Available | Positive | 4411505 - 4412464 | 33726.1 |
| glycosyl transferase | RPYSC3_RS20365 | Not Available | Positive | 4412518 - 4413519 | 34780.9 |
| polysaccharide biosynthesis protein | RPYSC3_RS20370 | Not Available | Negative | 4413532 - 4415457 | 70683.8 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | RPYSC3_RS20375 | Not Available | Negative | 4415498 - 4416970 | 52167.9 |
| adp-glyceromanno-heptose 6-epimerase | RPYSC3_RS20380 | Not Available | Negative | 4416995 - 4417975 | 36160.8 |
| lipopolysaccharide heptosyltransferase ii | RPYSC3_RS20385 | Not Available | Positive | 4418159 - 4419235 | 38823.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
