Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| negative regulator of septation ring formation | RPYSC3_RS20240 | Not Available | Positive | 4378680 - 4384757 | 214997.0 |
| amidase | RPYSC3_RS20245 | Not Available | Positive | 4385183 - 4386667 | 52336.1 |
| nyn domain-containing protein | RPYSC3_RS20250 | Not Available | Positive | 4386921 - 4387724 | 29318.7 |
| mlad family protein | RPYSC3_RS20255 | Not Available | Negative | 4387977 - 4388870 | 31828.8 |
| abc transporter atp-binding protein | RPYSC3_RS20260 | Not Available | Negative | 4389008 - 4389781 | 27944.1 |
| abc transporter permease | RPYSC3_RS20265 | Not Available | Negative | 4389784 - 4390935 | 41049.0 |
| n-acetyl-d-glu racemase dgca | RPYSC3_RS20270 | Not Available | Positive | 4391040 - 4392035 | 34627.6 |
| mfs transporter | RPYSC3_RS20275 | Not Available | Negative | 4392005 - 4393213 | 42165.4 |
| hypothetical protein | RPYSC3_RS20280 | Not Available | Positive | 4393290 - 4394756 | 49340.2 |
| threonine/serine dehydratase | RPYSC3_RS20285 | Not Available | Negative | 4394789 - 4395784 | 33742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
