Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | RPYSC3_RS20190 | Not Available | Negative | 4368314 - 4369516 | 42749.0 |
| glycosyltransferase family 4 protein | RPYSC3_RS20195 | Not Available | Negative | 4369590 - 4370915 | 47930.1 |
| glycosyltransferase family 2 protein | RPYSC3_RS20200 | Not Available | Positive | 4371067 - 4372128 | 38644.4 |
| gdp-mannose 4,6-dehydratase | RPYSC3_RS20205 | Not Available | Positive | 4372197 - 4373183 | 36430.6 |
| nad-dependent epimerase/dehydratase family protein | RPYSC3_RS20210 | Not Available | Positive | 4373183 - 4374166 | 34306.3 |
| chloride channel protein | RPYSC3_RS20215 | Not Available | Negative | 4374188 - 4375462 | 43915.5 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS20220 | Not Available | Negative | 4375638 - 4376666 | 36989.0 |
| acyl-coa thioesterase | RPYSC3_RS20225 | Not Available | Positive | 4376828 - 4377283 | 16941.2 |
| 2fe-2s iron-sulfur cluster-binding protein | RPYSC3_RS20230 | Not Available | Negative | 4377464 - 4377784 | 11489.5 |
| hpt domain-containing protein | RPYSC3_RS20235 | Not Available | Negative | 4377881 - 4378240 | 12491.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
