Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | RPYSC3_RS20040 | Not Available | Positive | 4328615 - 4330762 | 78766.2 |
| thiamine pyrophosphate-binding protein | RPYSC3_RS20045 | Not Available | Negative | 4330775 - 4332577 | 64319.5 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS20050 | Not Available | Negative | 4332601 - 4333407 | 28920.1 |
| nucleotidyltransferase family protein | RPYSC3_RS20055 | Not Available | Negative | 4333404 - 4334354 | 34495.5 |
| pfkb family carbohydrate kinase | RPYSC3_RS20060 | Not Available | Negative | 4334351 - 4335835 | 53492.5 |
| zinc-binding dehydrogenase | RPYSC3_RS20065 | Not Available | Negative | 4335841 - 4336896 | 37375.5 |
| alpha-ketoacid dehydrogenase subunit beta | RPYSC3_RS20070 | Not Available | Negative | 4337047 - 4338099 | 37580.3 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | RPYSC3_RS20075 | Not Available | Negative | 4338111 - 4339088 | 34969.6 |
| class i sam-dependent methyltransferase | RPYSC3_RS20080 | Not Available | Negative | 4339085 - 4339744 | 25069.7 |
| gdp-mannose 4,6-dehydratase | RPYSC3_RS20085 | Not Available | Negative | 4339753 - 4340790 | 38782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
