Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS19845 | Not Available | Negative | 4288263 - 4288496 | 8991.73 |
| hypothetical protein | RPYSC3_RS19850 | Not Available | Positive | 4288620 - 4289114 | 17756.5 |
| hypothetical protein | RPYSC3_RS25195 | Not Available | Positive | 4289330 - 4289500 | 5716.65 |
| gfa family protein | RPYSC3_RS19855 | Not Available | Positive | 4289649 - 4290008 | 12949.8 |
| glutathione s-transferase family protein | RPYSC3_RS19860 | Not Available | Negative | 4290167 - 4290874 | 26845.7 |
| tim44 domain-containing protein | RPYSC3_RS19865 | Not Available | Negative | 4290996 - 4292027 | 35883.4 |
| cell cycle histidine kinase ccka | RPYSC3_RS19870 | Not Available | Negative | 4292357 - 4295005 | 95115.0 |
| flagellar biosynthesis protein flhb | RPYSC3_RS19875 | Not Available | Negative | 4295109 - 4296182 | 39622.8 |
| flagellar biosynthetic protein flir | RPYSC3_RS19880 | Not Available | Negative | 4296209 - 4296976 | 27141.7 |
| flagellar biosynthesis protein fliq | RPYSC3_RS19885 | Not Available | Negative | 4297083 - 4297346 | 9290.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
