Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | RPYSC3_RS19650 | Not Available | Negative | 4246269 - 4246670 | 13953.7 |
| antitoxin | RPYSC3_RS19655 | Not Available | Negative | 4246667 - 4246903 | 8953.99 |
| trmj/yjtd family rna methyltransferase | RPYSC3_RS19660 | Not Available | Negative | 4246966 - 4248162 | 43589.0 |
| nadp-dependent isocitrate dehydrogenase | RPYSC3_RS19665 | Not Available | Positive | 4248553 - 4249776 | 45253.3 |
| caspase family protein | RPYSC3_RS19670 | Not Available | Negative | 4249857 - 4251770 | 71141.2 |
| ynfa family protein | RPYSC3_RS19680 | Not Available | Positive | 4252286 - 4252618 | 11810.7 |
| helix-turn-helix transcriptional regulator | RPYSC3_RS19685 | Not Available | Positive | 4252749 - 4253609 | 30646.8 |
| tonb-dependent siderophore receptor | RPYSC3_RS19690 | Not Available | Positive | 4254071 - 4256059 | 73030.4 |
| hypothetical protein | RPYSC3_RS19695 | Not Available | Positive | 4256078 - 4256608 | 19140.8 |
| pepsy-associated tm helix domain-containing protein | RPYSC3_RS19700 | Not Available | Positive | 4256662 - 4257636 | 34338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
