Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS19600 | Not Available | Negative | 4239622 - 4239861 | 9220.06 |
| phosphoribosylformylglycinamidine synthase subunit purs | RPYSC3_RS19605 | Not Available | Negative | 4239885 - 4240130 | 8420.26 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | RPYSC3_RS19610 | Not Available | Negative | 4240320 - 4241087 | 29158.4 |
| duf1476 domain-containing protein | RPYSC3_RS19615 | Not Available | Positive | 4241385 - 4241708 | 11954.1 |
| oxaloacetate decarboxylase | RPYSC3_RS19620 | Not Available | Negative | 4242381 - 4243199 | 28039.3 |
| hypothetical protein | RPYSC3_RS19625 | Not Available | Positive | 4243654 - 4243893 | 9057.81 |
| fic/doc family protein | RPYSC3_RS19630 | Not Available | Positive | 4243890 - 4244615 | 26753.7 |
| transcription elongation factor grea | RPYSC3_RS19635 | Not Available | Negative | 4244669 - 4245154 | 17107.2 |
| mismatch-specific dna-glycosylase | RPYSC3_RS19640 | Not Available | Negative | 4245215 - 4245703 | 18469.0 |
| duf2147 domain-containing protein | RPYSC3_RS19645 | Not Available | Negative | 4245752 - 4246153 | 13678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
