Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xdhc family protein | RPYSC3_RS19495 | Not Available | Negative | 4220554 - 4220880 | 11294.3 |
| vwa domain-containing protein | RPYSC3_RS19500 | Not Available | Negative | 4220919 - 4222136 | 45526.3 |
| aaa family atpase | RPYSC3_RS19505 | Not Available | Negative | 4222461 - 4223369 | 33163.8 |
| fad binding domain-containing protein | RPYSC3_RS19510 | Not Available | Negative | 4223389 - 4224195 | 28512.4 |
| (2fe-2s)-binding protein | RPYSC3_RS19515 | Not Available | Negative | 4224271 - 4224756 | 17135.6 |
| coxg family protein | RPYSC3_RS19520 | Not Available | Negative | 4224931 - 4225395 | 16029.1 |
| hypothetical protein | RPYSC3_RS19525 | Not Available | Negative | 4225590 - 4226117 | 18883.3 |
| hypothetical protein | RPYSC3_RS25180 | Not Available | Positive | 4226444 - 4226932 | 17399.8 |
| abc transporter permease subunit | RPYSC3_RS19535 | Not Available | Positive | 4226945 - 4227862 | 32959.6 |
| high-affinity branched-chain amino acid abc transporter permease livm | RPYSC3_RS19540 | Not Available | Positive | 4227875 - 4229206 | 47496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
