Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin | RPYSC3_RS19350 | Not Available | Negative | 4189366 - 4189869 | 18101.8 |
| poly(r)-hydroxyalkanoic acid synthase subunit phae | RPYSC3_RS19355 | Not Available | Negative | 4190086 - 4190400 | 11100.2 |
| esterase/lipase family protein | RPYSC3_RS19360 | Not Available | Negative | 4190449 - 4191240 | 28751.7 |
| duf6489 family protein | RPYSC3_RS19365 | Not Available | Negative | 4191259 - 4191513 | 9575.7 |
| fad-dependent oxidoreductase | RPYSC3_RS19370 | Not Available | Negative | 4191604 - 4192857 | 45480.0 |
| mexw/mexi family multidrug efflux rnd transporter permease subunit | RPYSC3_RS19375 | Not Available | Negative | 4193135 - 4196239 | 111441.0 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS19380 | Not Available | Negative | 4196381 - 4197574 | 42480.2 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS19385 | Not Available | Negative | 4197576 - 4198277 | 25514.7 |
| cytochrome p450 | RPYSC3_RS19390 | Not Available | Positive | 4198506 - 4199726 | 44230.1 |
| l,d-transpeptidase | RPYSC3_RS19395 | Not Available | Positive | 4199898 - 4201457 | 56331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
