Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | RPYSC3_RS19300 | Not Available | Positive | 4178937 - 4180478 | 54711.4 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | RPYSC3_RS19305 | Not Available | Positive | 4180646 - 4181623 | 37228.7 |
| fumarylacetoacetate hydrolase family protein | RPYSC3_RS19310 | Not Available | Positive | 4181778 - 4182650 | 31814.7 |
| thiamine pyrophosphate-dependent enzyme | RPYSC3_RS19315 | Not Available | Positive | 4182679 - 4184304 | 57482.3 |
| 1,2-phenylacetyl-coa epoxidase subunit paae | RPYSC3_RS19320 | Not Available | Negative | 4184451 - 4185539 | 39459.6 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | RPYSC3_RS19325 | Not Available | Negative | 4185548 - 4186051 | 17983.6 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | RPYSC3_RS19330 | Not Available | Negative | 4186045 - 4186812 | 28815.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | RPYSC3_RS19335 | Not Available | Negative | 4187031 - 4187318 | 10504.4 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | RPYSC3_RS19340 | Not Available | Negative | 4187352 - 4188335 | 37046.9 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS19345 | Not Available | Positive | 4188457 - 4189134 | 24730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
