Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | RPYSC3_RS19250 | Not Available | Negative | 4165500 - 4167203 | 59049.0 |
| cache domain-containing protein | RPYSC3_RS19255 | Not Available | Negative | 4167257 - 4167715 | 16318.8 |
| transglutaminase n-terminal domain-containing protein | RPYSC3_RS19260 | Not Available | Negative | 4167913 - 4168791 | 31868.1 |
| circularly permuted type 2 atp-grasp protein | RPYSC3_RS19265 | Not Available | Negative | 4168788 - 4171289 | 90812.4 |
| duf2126 domain-containing protein | RPYSC3_RS19270 | Not Available | Negative | 4171315 - 4174656 | 124640.0 |
| hpch/hpai aldolase family protein | RPYSC3_RS19275 | Not Available | Negative | 4174892 - 4175668 | 27866.6 |
| malate/lactate/ureidoglycolate dehydrogenase | RPYSC3_RS19280 | Not Available | Negative | 4175806 - 4176891 | 37731.0 |
| homoprotocatechuate degradation operon regulator hpar | RPYSC3_RS19285 | Not Available | Negative | 4176932 - 4177471 | 20068.5 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | RPYSC3_RS19290 | Not Available | Positive | 4177718 - 4178524 | 28913.7 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | RPYSC3_RS19295 | Not Available | Positive | 4178546 - 4178944 | 14696.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
