Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| squalene--hopene cyclase | RPYSC3_RS19200 | Not Available | Negative | 4152488 - 4154449 | 72285.2 |
| hydroxysqualene dehydroxylase hpne | RPYSC3_RS19205 | Not Available | Negative | 4154483 - 4155739 | 43868.0 |
| presqualene diphosphate synthase hpnd | RPYSC3_RS19210 | Not Available | Negative | 4155739 - 4156578 | 30897.4 |
| squalene synthase hpnc | RPYSC3_RS19215 | Not Available | Negative | 4156575 - 4157453 | 32775.3 |
| hypothetical protein | RPYSC3_RS19220 | Not Available | Negative | 4157666 - 4157905 | 8668.47 |
| hypothetical protein | RPYSC3_RS19225 | Not Available | Positive | 4158296 - 4158799 | 16956.8 |
| efflux rnd transporter permease subunit | RPYSC3_RS19230 | Not Available | Negative | 4158894 - 4161263 | 85249.3 |
| ethanolamine ammonia-lyase subunit eutc | RPYSC3_RS19235 | Not Available | Negative | 4161470 - 4162237 | 25946.4 |
| hopanoid c-2 methylase | RPYSC3_RS19240 | Not Available | Negative | 4162246 - 4163829 | 60079.6 |
| ethanolamine ammonia-lyase subunit eutb | RPYSC3_RS19245 | Not Available | Negative | 4164056 - 4165438 | 49066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
