Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase subunit alpha | RPYSC3_RS19045 | Not Available | Positive | 4113543 - 4115162 | 58232.1 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS19050 | Not Available | Negative | 4115352 - 4116125 | 26635.1 |
| pimeloyl-coa dehydrogenase small subunit | RPYSC3_RS19055 | Not Available | Negative | 4116396 - 4117538 | 40438.3 |
| pimeloyl-coa dehydrogenase large subunit | RPYSC3_RS19060 | Not Available | Negative | 4117707 - 4118897 | 44529.1 |
| acetyl-coa c-acyltransferase | RPYSC3_RS19065 | Not Available | Negative | 4119060 - 4120247 | 41105.5 |
| dicarboxylate--coa ligase pima | RPYSC3_RS19070 | Not Available | Negative | 4120279 - 4121937 | 60017.3 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RPYSC3_RS19075 | Not Available | Negative | 4122119 - 4124218 | 73670.6 |
| iclr family transcriptional regulator | RPYSC3_RS19080 | Not Available | Positive | 4124351 - 4125217 | 31444.3 |
| abc transporter atp-binding protein | RPYSC3_RS19085 | Not Available | Positive | 4125248 - 4126048 | 28889.1 |
| abc transporter atp-binding protein | RPYSC3_RS19090 | Not Available | Positive | 4126045 - 4126758 | 25979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
