Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | RPYSC3_RS01795 | Not Available | Positive | 371327 - 371932 | 22331.6 |
| nadph-dependent fmn reductase | RPYSC3_RS01800 | Not Available | Positive | 372039 - 372620 | 20925.2 |
| orotidine-5'-phosphate decarboxylase | RPYSC3_RS01805 | Not Available | Positive | 372628 - 373341 | 24651.8 |
| duf1330 domain-containing protein | RPYSC3_RS01810 | Not Available | Positive | 373366 - 373674 | 11432.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | RPYSC3_RS01815 | Not Available | Positive | 373769 - 374584 | 27754.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | RPYSC3_RS01820 | Not Available | Negative | 374666 - 376180 | 53477.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | RPYSC3_RS01825 | Not Available | Negative | 376271 - 377167 | 32091.7 |
| duf2244 domain-containing protein | RPYSC3_RS01830 | Not Available | Negative | 377218 - 377733 | 18715.8 |
| endonuclease iii | RPYSC3_RS01835 | Not Available | Positive | 377756 - 378541 | 28658.0 |
| s10 family peptidase | RPYSC3_RS01840 | Not Available | Negative | 378671 - 380236 | 56071.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
