Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | RPYSC3_RS18945 | Not Available | Negative | 4089103 - 4089543 | 16264.7 |
| hypothetical protein | RPYSC3_RS18950 | Not Available | Negative | 4089543 - 4089758 | 8232.87 |
| abc transporter permease | RPYSC3_RS18955 | Not Available | Negative | 4089793 - 4090971 | 43519.3 |
| microcin c abc transporter permease yejb | RPYSC3_RS18960 | Not Available | Negative | 4090971 - 4092080 | 40926.2 |
| extracellular solute-binding protein | RPYSC3_RS18965 | Not Available | Negative | 4092082 - 4093950 | 69041.9 |
| extracellular solute-binding protein | RPYSC3_RS18970 | Not Available | Negative | 4093965 - 4095860 | 71051.1 |
| c-type cytochrome | RPYSC3_RS18975 | Not Available | Negative | 4096073 - 4096627 | 19657.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | RPYSC3_RS18980 | Not Available | Positive | 4096827 - 4097564 | 26273.8 |
| prephenate dehydratase | RPYSC3_RS18985 | Not Available | Positive | 4097635 - 4098477 | 30632.7 |
| llm class flavin-dependent oxidoreductase | RPYSC3_RS18990 | Not Available | Negative | 4098629 - 4099645 | 37042.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
