Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quinol monooxygenase | RPYSC3_RS18790 | Not Available | Negative | 4059389 - 4059688 | 10989.4 |
| urease subunit alpha | RPYSC3_RS18795 | Not Available | Negative | 4059961 - 4061673 | 60493.6 |
| hd domain-containing protein | RPYSC3_RS18800 | Not Available | Negative | 4061670 - 4062206 | 19757.5 |
| urease subunit beta | RPYSC3_RS18805 | Not Available | Negative | 4062206 - 4062511 | 11019.1 |
| urease subunit gamma | RPYSC3_RS18810 | Not Available | Negative | 4062648 - 4062950 | 11088.6 |
| urease accessory protein ured | RPYSC3_RS18815 | Not Available | Negative | 4062997 - 4063836 | 29529.6 |
| urea abc transporter atp-binding subunit urte | RPYSC3_RS18820 | Not Available | Negative | 4064114 - 4064809 | 24987.5 |
| urea abc transporter atp-binding protein urtd | RPYSC3_RS18825 | Not Available | Negative | 4065029 - 4065793 | 28275.0 |
| urea abc transporter permease subunit urtc | RPYSC3_RS18830 | Not Available | Negative | 4065798 - 4066964 | 42095.3 |
| urea abc transporter permease subunit urtb | RPYSC3_RS18840 | Not Available | Negative | 4067311 - 4068924 | 56521.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
