Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | RPYSC3_RS18740 | Not Available | Negative | 4048487 - 4051240 | 100298.0 |
| ku protein | RPYSC3_RS18745 | Not Available | Positive | 4051374 - 4052258 | 33042.6 |
| duf6496 domain-containing protein | RPYSC3_RS18750 | Not Available | Negative | 4052484 - 4052912 | 15071.3 |
| sulfurtransferase tusa family protein | RPYSC3_RS18755 | Not Available | Negative | 4052976 - 4053233 | 9256.48 |
| molybdenum cofactor guanylyltransferase moba | RPYSC3_RS18760 | Not Available | Positive | 4053360 - 4053980 | 22171.7 |
| alcohol dehydrogenase | RPYSC3_RS18765 | Not Available | Negative | 4054092 - 4055144 | 36670.9 |
| nad(p)h-dependent flavin oxidoreductase | RPYSC3_RS18770 | Not Available | Negative | 4055224 - 4056213 | 34796.8 |
| amp-binding protein | RPYSC3_RS18775 | Not Available | Positive | 4056298 - 4057860 | 56566.1 |
| urease accessory protein uref | RPYSC3_RS18780 | Not Available | Negative | 4058012 - 4058734 | 25192.6 |
| urease accessory protein uree | RPYSC3_RS18785 | Not Available | Negative | 4058724 - 4059380 | 24382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
