Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl aminopeptidase | RPYSC3_RS18635 | Not Available | Positive | 4018012 - 4019001 | 35677.4 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS18640 | Not Available | Negative | 4019011 - 4019784 | 26185.6 |
| winged helix-turn-helix transcriptional regulator | RPYSC3_RS18645 | Not Available | Positive | 4019882 - 4020364 | 18009.8 |
| duf4286 family protein | RPYSC3_RS18650 | Not Available | Positive | 4020384 - 4021058 | 24216.0 |
| bifunctional transaldolase/phosoglucose isomerase | RPYSC3_RS18655 | Not Available | Positive | 4021274 - 4024126 | 101532.0 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | RPYSC3_RS18665 | Not Available | Positive | 4024299 - 4025339 | 37800.1 |
| glucose-6-phosphate dehydrogenase | RPYSC3_RS18670 | Not Available | Positive | 4025336 - 4026850 | 56188.0 |
| 6-phosphogluconolactonase | RPYSC3_RS18675 | Not Available | Positive | 4026854 - 4027594 | 26658.7 |
| gluconokinase | RPYSC3_RS18680 | Not Available | Positive | 4027599 - 4028126 | 18993.8 |
| cof-type had-iib family hydrolase | RPYSC3_RS18685 | Not Available | Positive | 4028247 - 4029065 | 29502.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
