Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS18530 | Not Available | Positive | 4000859 - 4001851 | 32880.5 |
| 3-mercaptopyruvate sulfurtransferase | RPYSC3_RS18535 | Not Available | Negative | 4001864 - 4002724 | 30218.7 |
| rhodanese-like domain-containing protein | RPYSC3_RS18540 | Not Available | Negative | 4002863 - 4003279 | 15010.0 |
| vwa domain-containing protein | RPYSC3_RS18545 | Not Available | Negative | 4003423 - 4004598 | 45644.5 |
| diguanylate cyclase | RPYSC3_RS18550 | Not Available | Positive | 4004767 - 4006701 | 70069.6 |
| glsb/yeaq/ymge family stress response membrane protein | RPYSC3_RS18555 | Not Available | Positive | 4006856 - 4007110 | 8461.04 |
| aaa family atpase | RPYSC3_RS18560 | Not Available | Positive | 4007226 - 4008068 | 32170.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | RPYSC3_RS18565 | Not Available | Positive | 4008485 - 4009528 | 38943.3 |
| gntr family transcriptional regulator | RPYSC3_RS18570 | Not Available | Positive | 4009532 - 4010287 | 27428.3 |
| pdr/vanb family oxidoreductase | RPYSC3_RS18575 | Not Available | Positive | 4010319 - 4011308 | 35399.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
