Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS18485 | Not Available | Positive | 3992438 - 3992797 | 12676.0 |
| hypothetical protein | RPYSC3_RS18490 | Not Available | Positive | 3993016 - 3993300 | 9663.68 |
| lytic murein transglycosylase | RPYSC3_RS18495 | Not Available | Negative | 3993377 - 3994615 | 45718.7 |
| tigr00645 family protein | RPYSC3_RS18500 | Not Available | Negative | 3994615 - 3995205 | 21694.1 |
| trans-aconitate 2-methyltransferase | RPYSC3_RS18505 | Not Available | Negative | 3995380 - 3996150 | 28701.5 |
| hypothetical protein | RPYSC3_RS18510 | Not Available | Negative | 3996244 - 3996864 | 21918.6 |
| energy-dependent translational throttle protein etta | RPYSC3_RS18515 | Not Available | Negative | 3997000 - 3998649 | 61698.4 |
| hypothetical protein | RPYSC3_RS18520 | Not Available | Positive | 3998890 - 3999090 | 7766.16 |
| l,d-transpeptidase | RPYSC3_RS18525 | Not Available | Negative | 3999170 - 4000435 | 43499.2 |
| hypothetical protein | RPYSC3_RS25015 | Not Available | Negative | 4000527 - 4000853 | 11847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
