Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | RPYSC3_RS01745 | Not Available | Negative | 361422 - 361784 | 13506.5 |
| nuclear transport factor 2 family protein | RPYSC3_RS01750 | Not Available | Positive | 361783 - 362184 | 14394.4 |
| radical sam family heme chaperone hemw | RPYSC3_RS01755 | Not Available | Negative | 362189 - 363346 | 42075.7 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | RPYSC3_RS01760 | Not Available | Negative | 363336 - 363968 | 22235.5 |
| ribonuclease ph | RPYSC3_RS01765 | Not Available | Negative | 364020 - 364733 | 25981.2 |
| heat-inducible transcriptional repressor hrca | RPYSC3_RS01770 | Not Available | Positive | 364888 - 365976 | 39032.2 |
| nucleotide exchange factor grpe | RPYSC3_RS01775 | Not Available | Positive | 366067 - 366690 | 22095.8 |
| hypothetical protein | RPYSC3_RS01780 | Not Available | Negative | 366794 - 367735 | 33410.1 |
| molecular chaperone dnak | RPYSC3_RS01785 | Not Available | Positive | 368070 - 369965 | 67965.0 |
| molecular chaperone dnaj | RPYSC3_RS01790 | Not Available | Positive | 370094 - 371233 | 40994.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
