Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RPYSC3_RS18030 | Not Available | Positive | 3893784 - 3894545 | 27706.6 |
| hypothetical protein | RPYSC3_RS18035 | Not Available | Negative | 3894631 - 3894978 | 11785.2 |
| l,d-transpeptidase | RPYSC3_RS18040 | Not Available | Positive | 3895247 - 3896017 | 28035.7 |
| spermidine synthase | RPYSC3_RS18045 | Not Available | Negative | 3896080 - 3898359 | 82068.6 |
| phytoene desaturase family protein | RPYSC3_RS18050 | Not Available | Positive | 3898521 - 3900131 | 57183.6 |
| hypothetical protein | RPYSC3_RS18055 | Not Available | Negative | 3900201 - 3900503 | 10515.7 |
| 50s ribosomal protein l11 methyltransferase | RPYSC3_RS18060 | Not Available | Positive | 3900947 - 3901837 | 31275.7 |
| hypothetical protein | RPYSC3_RS18065 | Not Available | Negative | 3901862 - 3902056 | 7126.47 |
| aminopeptidase p family protein | RPYSC3_RS18070 | Not Available | Positive | 3902253 - 3904082 | 66167.5 |
| multidrug effflux mfs transporter | RPYSC3_RS18075 | Not Available | Positive | 3904452 - 3905738 | 45193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
