Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | RPYSC3_RS01695 | Not Available | Negative | 350950 - 351900 | 35155.5 |
| atp-binding protein | RPYSC3_RS01700 | Not Available | Negative | 352061 - 353962 | 66799.9 |
| yifb family mg chelatase-like aaa atpase | RPYSC3_RS01705 | Not Available | Negative | 354089 - 355627 | 53782.1 |
| hypothetical protein | RPYSC3_RS01710 | Not Available | Negative | 355727 - 355951 | 7966.72 |
| 4-coumaroyl-homoserine lactone synthase | RPYSC3_RS01715 | Not Available | Negative | 355948 - 356604 | 24617.6 |
| hth-type quorum sensing-dependent transcriptional regulator rpar | RPYSC3_RS01720 | Not Available | Negative | 356690 - 357421 | 27037.5 |
| glutathione synthase | RPYSC3_RS01725 | Not Available | Negative | 357638 - 358579 | 34582.8 |
| yran family protein | RPYSC3_RS01730 | Not Available | Negative | 358652 - 359044 | 14265.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | RPYSC3_RS01735 | Not Available | Negative | 359031 - 359987 | 34362.2 |
| penicillin-binding protein activator | RPYSC3_RS01740 | Not Available | Positive | 360205 - 361404 | 40702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
