Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS25010 | Not Available | Negative | 3873642 - 3874013 | 13757.3 |
| hepn domain-containing protein | RPYSC3_RS17935 | Not Available | Negative | 3873992 - 3874405 | 15568.8 |
| thymidylate synthase | RPYSC3_RS17940 | Not Available | Negative | 3874409 - 3875203 | 29596.7 |
| tripartite tricarboxylate transporter substrate-binding protein | RPYSC3_RS17945 | Not Available | Negative | 3875376 - 3876383 | 35510.0 |
| tripartite tricarboxylate transporter permease | RPYSC3_RS17950 | Not Available | Negative | 3876485 - 3878002 | 52828.4 |
| tripartite tricarboxylate transporter tctb family protein | RPYSC3_RS17955 | Not Available | Negative | 3878010 - 3878510 | 17355.5 |
| chromate transporter | RPYSC3_RS17960 | Not Available | Negative | 3878581 - 3879111 | 17467.7 |
| chromate transporter | RPYSC3_RS17965 | Not Available | Negative | 3879108 - 3879704 | 21058.6 |
| Tmrna,resume consensus sequence (at 211): aatagttgccaacgacaa | Not Available | Not Available | Positive | 3879870 - 3880216 | Not Available |
| sspb family protein | RPYSC3_RS17975 | Not Available | Positive | 3880429 - 3880965 | 19562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
