Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein exbd | RPYSC3_RS17835 | Not Available | Negative | 3853799 - 3854248 | 16261.8 |
| tonb-system energizer exbb | RPYSC3_RS17840 | Not Available | Negative | 3854252 - 3855163 | 31575.6 |
| fe2+-dependent dioxygenase | RPYSC3_RS17845 | Not Available | Negative | 3855160 - 3855849 | 25335.2 |
| tonb-dependent receptor | RPYSC3_RS17850 | Not Available | Negative | 3855874 - 3858255 | 85854.0 |
| hypothetical protein | RPYSC3_RS17855 | Not Available | Negative | 3858543 - 3858785 | 9118.15 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS17860 | Not Available | Positive | 3859122 - 3860345 | 42937.0 |
| multidrug efflux rnd transporter permease subunit | RPYSC3_RS17865 | Not Available | Positive | 3860348 - 3863485 | 113016.0 |
| pin domain-containing protein | RPYSC3_RS17870 | Not Available | Negative | 3863528 - 3863932 | 14588.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | RPYSC3_RS17875 | Not Available | Negative | 3863929 - 3864159 | 8939.67 |
| Trna-gln | Not Available | Not Available | Positive | 3864441 - 3864514 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
