Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | RPYSC3_RS17540 | Not Available | Positive | 3788651 - 3789286 | 22431.0 |
| cbs domain-containing protein | RPYSC3_RS17545 | Not Available | Negative | 3789308 - 3789736 | 15774.2 |
| rhomboid family intramembrane serine protease | RPYSC3_RS17550 | Not Available | Negative | 3789974 - 3790744 | 27489.7 |
| pas domain-containing protein | RPYSC3_RS17555 | Not Available | Positive | 3791254 - 3791823 | 20714.1 |
| crp/fnr family transcriptional regulator | RPYSC3_RS17560 | Not Available | Negative | 3791793 - 3792557 | 27214.9 |
| pilz domain-containing protein | RPYSC3_RS17565 | Not Available | Positive | 3793000 - 3793605 | 22559.4 |
| transglutaminase-like cysteine peptidase | RPYSC3_RS17570 | Not Available | Positive | 3793937 - 3794557 | 22990.2 |
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS17575 | Not Available | Negative | 3794697 - 3795284 | 21855.1 |
| porin | RPYSC3_RS17580 | Not Available | Positive | 3795810 - 3797300 | 52188.5 |
| hypothetical protein | RPYSC3_RS17585 | Not Available | Positive | 3797521 - 3797712 | 7052.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
