Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | RPYSC3_RS17490 | Not Available | Positive | 3774083 - 3776146 | 77292.0 |
| hypothetical protein | RPYSC3_RS17495 | Not Available | Negative | 3776424 - 3777002 | 20581.9 |
| nitroreductase | RPYSC3_RS17500 | Not Available | Positive | 3777282 - 3777845 | 20299.4 |
| amidohydrolase | RPYSC3_RS17505 | Not Available | Negative | 3777894 - 3779768 | 67386.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | RPYSC3_RS17510 | Not Available | Negative | 3779863 - 3782337 | 91069.5 |
| hypothetical protein | RPYSC3_RS17515 | Not Available | Negative | 3782548 - 3783606 | 36504.9 |
| patatin-like phospholipase family protein | RPYSC3_RS17520 | Not Available | Positive | 3783839 - 3784870 | 36408.8 |
| hypothetical protein | RPYSC3_RS17525 | Not Available | Negative | 3784890 - 3785099 | 7628.64 |
| pepsy-associated tm helix domain-containing protein | RPYSC3_RS17530 | Not Available | Negative | 3785096 - 3786211 | 40431.6 |
| tonb-dependent siderophore receptor | RPYSC3_RS17535 | Not Available | Negative | 3786240 - 3788501 | 81401.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
