Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease atpase subunit hslu | RPYSC3_RS01645 | Not Available | Negative | 343347 - 344648 | 47463.1 |
| duf2585 domain-containing protein | RPYSC3_RS01650 | Not Available | Negative | 344690 - 345301 | 22361.4 |
| atp-dependent protease subunit hslv | RPYSC3_RS01655 | Not Available | Negative | 345298 - 345867 | 19798.8 |
| imidazoleglycerol-phosphate dehydratase hisb | RPYSC3_RS01660 | Not Available | Positive | 346055 - 346648 | 21400.7 |
| duf2628 domain-containing protein | RPYSC3_RS01665 | Not Available | Positive | 346676 - 347197 | 19033.8 |
| imidazole glycerol phosphate synthase subunit hish | RPYSC3_RS01670 | Not Available | Positive | 347194 - 347844 | 23655.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | RPYSC3_RS01675 | Not Available | Positive | 347841 - 348578 | 25552.1 |
| imidazole glycerol phosphate synthase subunit hisf | RPYSC3_RS01680 | Not Available | Positive | 348589 - 349356 | 27230.8 |
| phosphoribosyl-atp diphosphatase | RPYSC3_RS01685 | Not Available | Positive | 349410 - 349733 | 11671.0 |
| type i pantothenate kinase | RPYSC3_RS01690 | Not Available | Positive | 349808 - 350764 | 36079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
