Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPYSC3_RS17380 | Not Available | Positive | 3757150 - 3757893 | 28445.7 |
| carbon-nitrogen hydrolase family protein | RPYSC3_RS17385 | Not Available | Positive | 3757953 - 3759626 | 60787.4 |
| lysr family transcriptional regulator | RPYSC3_RS17390 | Not Available | Positive | 3759705 - 3760652 | 35798.0 |
| transglycosylase slt domain-containing protein | RPYSC3_RS17395 | Not Available | Negative | 3760660 - 3761700 | 35844.9 |
| hypothetical protein | RPYSC3_RS17400 | Not Available | Positive | 3761895 - 3762602 | 24663.8 |
| phosphoribosyl-amp cyclohydrolase | RPYSC3_RS17405 | Not Available | Negative | 3762604 - 3763059 | 16880.8 |
| gtp cyclohydrolase i fole | RPYSC3_RS17410 | Not Available | Negative | 3763088 - 3763777 | 25703.7 |
| iron-sulfur cluster assembly scaffold protein | RPYSC3_RS17415 | Not Available | Positive | 3764045 - 3764497 | 15971.1 |
| hypothetical protein | RPYSC3_RS17420 | Not Available | Negative | 3764637 - 3765527 | 30824.8 |
| membrane protein insertion efficiency factor yidd | RPYSC3_RS17425 | Not Available | Positive | 3765768 - 3766157 | 14449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
