Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RPYSC3_RS16985 | Not Available | Negative | 3674743 - 3675972 | 44299.8 |
| alpha/beta fold hydrolase | RPYSC3_RS16990 | Not Available | Negative | 3676283 - 3677092 | 29405.3 |
| amp-binding protein | RPYSC3_RS16995 | Not Available | Negative | 3677120 - 3678643 | 55375.2 |
| hypothetical protein | RPYSC3_RS17000 | Not Available | Negative | 3678634 - 3679086 | 16170.2 |
| amidohydrolase family protein | RPYSC3_RS17005 | Not Available | Negative | 3679118 - 3680146 | 37104.9 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS17010 | Not Available | Positive | 3680321 - 3681529 | 42734.2 |
| aromatic ring-hydroxylating oxygenase subunit alpha | RPYSC3_RS17015 | Not Available | Positive | 3681559 - 3682848 | 48556.4 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | RPYSC3_RS17020 | Not Available | Positive | 3682861 - 3683346 | 18632.0 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS17025 | Not Available | Positive | 3683355 - 3684116 | 26444.9 |
| non-heme iron oxygenase ferredoxin subunit | RPYSC3_RS17030 | Not Available | Positive | 3684113 - 3684442 | 11497.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
