Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l1 | RPYSC3_RS16825 | Not Available | Negative | 3646534 - 3647223 | 24025.5 |
| 50s ribosomal protein l11 | RPYSC3_RS16830 | Not Available | Negative | 3647231 - 3647659 | 15443.9 |
| transcription termination/antitermination protein nusg | RPYSC3_RS16835 | Not Available | Negative | 3647905 - 3648435 | 19901.9 |
| preprotein translocase subunit sece | RPYSC3_RS16840 | Not Available | Negative | 3648452 - 3648640 | 7025.83 |
| Trna-trp | Not Available | Not Available | Positive | 3648940 - 3649015 | Not Available |
| elongation factor tu | RPYSC3_RS16855 | Not Available | Negative | 3649441 - 3650631 | 43365.3 |
| serine hydrolase domain-containing protein | RPYSC3_RS16860 | Not Available | Positive | 3650817 - 3652040 | 44393.7 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS16865 | Not Available | Negative | 3652209 - 3652976 | 26878.2 |
| histidine phosphatase family protein | RPYSC3_RS16870 | Not Available | Negative | 3653159 - 3653914 | 27595.5 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS16875 | Not Available | Positive | 3654071 - 3654856 | 26806.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
