Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RPYSC3_RS16775 | Not Available | Negative | 3627618 - 3628826 | 41409.7 |
| voc family protein | RPYSC3_RS16780 | Not Available | Negative | 3629043 - 3629471 | 15899.0 |
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS16785 | Not Available | Positive | 3629617 - 3630069 | 16466.2 |
| abc transporter atp-binding protein | RPYSC3_RS16790 | Not Available | Negative | 3630174 - 3632294 | 76642.5 |
| fad-dependent oxidoreductase | RPYSC3_RS16795 | Not Available | Negative | 3632414 - 3634477 | 77304.5 |
| dna-directed rna polymerase subunit beta' | RPYSC3_RS16800 | Not Available | Negative | 3634780 - 3638982 | 155910.0 |
| dna-directed rna polymerase subunit beta | RPYSC3_RS16805 | Not Available | Negative | 3639124 - 3643248 | 153669.0 |
| 50s ribosomal protein l7/l12 | RPYSC3_RS16810 | Not Available | Negative | 3643715 - 3644092 | 12848.6 |
| 50s ribosomal protein l10 | RPYSC3_RS16815 | Not Available | Negative | 3644148 - 3644666 | 17697.7 |
| 2-hydroxyacid dehydrogenase | RPYSC3_RS16820 | Not Available | Negative | 3645484 - 3646434 | 32955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
