Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | RPYSC3_RS16470 | Not Available | Negative | 3574476 - 3576008 | 56050.6 |
| duf4260 domain-containing protein | RPYSC3_RS16475 | Not Available | Positive | 3576286 - 3576702 | 14449.9 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | RPYSC3_RS16480 | Not Available | Negative | 3576706 - 3576981 | 9745.83 |
| flagellar hook-length control protein flik | RPYSC3_RS16485 | Not Available | Negative | 3576978 - 3578780 | 59543.5 |
| atp12 family chaperone protein | RPYSC3_RS16490 | Not Available | Negative | 3578850 - 3579635 | 28000.9 |
| hypothetical protein | RPYSC3_RS16495 | Not Available | Negative | 3579653 - 3580012 | 12410.2 |
| rlua family pseudouridine synthase | RPYSC3_RS16500 | Not Available | Negative | 3580053 - 3581435 | 49629.9 |
| hypothetical protein | RPYSC3_RS16505 | Not Available | Negative | 3581641 - 3581919 | 9703.11 |
| dienelactone hydrolase family protein | RPYSC3_RS16510 | Not Available | Negative | 3581992 - 3582972 | 34899.1 |
| chat domain-containing protein | RPYSC3_RS16515 | Not Available | Positive | 3583086 - 3586493 | 120959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
